Efficient reconstruction of sequences from their subsequences or supersequences
Abstract:
In the paper two combinatorial problems for the set Fqn of sequences of length n over the alphabet Fq={0,1,...,q-1} are considered. The maximum size Nq-(n,t) of the set of common subsequences of length n-t and the maximum size Nq+(n,t) of the set of common supersequences of length n+t of two different sequences of Fqn are found for any nonnegative integers n and t. The number Nq-(n,t)+1 (respectively, Nq+(n,t)+1) is equal to the minimum number N of different subsequences of length n-t (supersequences of length n+t) of an unknown sequence X ∈ Fqn which are sufficient for its reconstruction. Simple algorithms to recover X ∈ Fqn from Nq-(n,t)+1 of its subsequences of length n-t and from Nq+(n,t)+1 of its supersequences of length n+t are given.
Keywords:
sequence, subsequence, supersequence, common subsequence, reconstruction, algorithms.
Publication language:english, pages:22
Research direction:
Mathematical problems and theory of numerical methods